EnhancerDB
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  3. rs10908840[chr1:154459477]
Enhancers that have rs10908840[chr1:154459477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154447249 154470672 enh12277
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Lung Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Stomach Pancreas (Panc1) Spleen Uterus Blood (T-cell) Heart
Transcript factors that have rs10908840[chr1:154459477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154459462 154459477 RFX5 JASPAR yes 32295876
chr1 154459476 154459487 FOSL2 JASPAR yes 32295878
chr1 154459477 154459488 NFE2 JASPAR yes 32295879
Genes associated with rs10908840[chr1:154459477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 153963235 153964626 + RPS27 ENSG00000177954.7 153963235 494851 Ovary 0.307564 1291