EnhancerDB
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  3. rs10980215[chr9:112893236]
Enhancers that have rs10980215[chr9:112893236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 112886125 112898289 enh25899
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Placenta Colon (HCT116) Thyroid Lung (PC-9) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs10980215[chr9:112893236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 112893225 112893241 POU4F2 JASPAR yes 86230352
chr9 112893225 112893241 POU4F3 JASPAR yes 86230353
chr9 112893227 112893241 POU4F1 JASPAR yes 86230354
chr9 112893229 112893237 LMX1A JASPAR yes 86230355
chr9 112893229 112893237 LMX1B JASPAR yes 86230356
chr9 112893229 112893237 NKX6-1 JASPAR yes 86230357
chr9 112893229 112893237 NKX6-2 JASPAR yes 86230358
chr9 112893229 112893237 VAX1 JASPAR yes 86230359
chr9 112893229 112893237 VAX2 JASPAR yes 86230360
chr9 112893229 112893237 VSX1 JASPAR yes 86230361
chr9 112893229 112893237 VSX2 JASPAR yes 86230362
chr9 112893232 112893245 POU3F3 JASPAR yes 86230363
chr9 112893232 112893246 POU1F1 JASPAR yes 86230364
chr9 112893233 112893245 POU3F2 JASPAR yes 86230365
chr9 112893236 112893242 NFIC JASPAR yes 86230366
Genes associated with rs10980215[chr9:112893236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More