EnhancerDB
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Enhancers that have rs11109478[chr12:98818674]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 98808646 98820983 enh14923
Cervix (HeLa-S3) Brain (SK-N-SH) Epithelial (MCF-7) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs11109478[chr12:98818674]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 98818492 98818756 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21568113
chr12 98818492 98818756 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053979
chr12 98818496 98818826 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21568114
chr12 98818496 98818826 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053980
chr12 98818502 98818906 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21568115
chr12 98818502 98818906 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053981
chr12 98818524 98818868 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21568116
chr12 98818524 98818868 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053982
chr12 98818533 98818989 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21568117
chr12 98818533 98818989 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053983
chr12 98818545 98818985 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108053984
chr12 98818572 98818963 CTCF UCSC Txn Factor no Conserved 108053985
chr12 98818574 98818938 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053986
chr12 98818579 98818963 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21568118
chr12 98818579 98818963 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053987
chr12 98818593 98818883 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108053988
chr12 98818593 98818923 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21568119
chr12 98818593 98818923 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053989
chr12 98818596 98818916 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21568120
chr12 98818596 98818916 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053990
chr12 98818601 98818961 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053991
chr12 98818605 98818975 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053992
chr12 98818622 98818892 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053993
chr12 98818622 98818932 SMC3 UCSC Txn Factor no Conserved 108053994
chr12 98818632 98818922 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053995
chr12 98818634 98818884 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108053996
chr12 98818635 98818905 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108053997
chr12 98818638 98818928 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21568121
chr12 98818638 98818928 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108053998
chr12 98818642 98818932 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053999
chr12 98818647 98818917 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108054000
chr12 98818649 98818899 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21568122
chr12 98818649 98818899 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108054001
chr12 98818651 98818932 RAD21 UCSC Txn Factor no Conserved 108054002
chr12 98818655 98818899 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108054003
chr12 98818661 98818679 NR3C1 JASPAR yes 82463447
chr12 98818661 98818679 NR3C1 JASPAR yes 123141273
chr12 98818662 98818892 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108054004
chr12 98818662 98818932 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108054005
Genes associated with rs11109478[chr12:98818674], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More