EnhancerDB
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  3. rs11117398[chr16:88302760]
Enhancers that have rs11117398[chr16:88302760]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs11117398[chr16:88302760]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88302300 88303727 TCF7L2 GTRD no Colon (HCT116) 21735724
chr16 88302375 88303197 TCF7L2 GTRD no Colon (HCT116) 21735725
chr16 88302520 88304633 TCF7L2 GTRD no Colon (HCT116) 21735726
chr16 88302748 88302763 ZIC4 JASPAR yes 12272388
chr16 88302749 88302763 ZIC1 JASPAR yes 12272389
chr16 88302751 88302771 TP63 JASPAR yes 12272390
chr16 88302754 88302765 E2F1 JASPAR yes 12272391
chr16 88302755 88302760 SP1 TRANSFAC yes 12272392
chr16 88302755 88302766 E2F4 JASPAR yes 12272393
chr16 88302755 88302766 E2F6 JASPAR yes 12272394
chr16 88302756 88302761 SP1 TRANSFAC yes 12272395
Genes associated with rs11117398[chr16:88302760], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More