EnhancerDB
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  3. rs11122271[chr1:230206696]
Enhancers that have rs11122271[chr1:230206696]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs11122271[chr1:230206696]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230204372 230206800 ZNF274 GTRD no Bone Marrow (K562) 107878308
chr1 230204435 230206723 ZNF274 GTRD no Bone Marrow (K562) 107878309
chr1 230206688 230206703 ESR2 JASPAR yes 36017946
chr1 230206695 230206706 ESRRA JASPAR yes 36017947
chr1 230206695 230206706 ESRRB JASPAR yes 36017948
chr1 230206696 230206704 NR4A2 JASPAR yes 36017949
Genes associated with rs11122271[chr1:230206696], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More