EnhancerDB
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  3. rs111226327[chr19:3399121]
Enhancers that have rs111226327[chr19:3399121]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3395005 3410358 enh17863
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs111226327[chr19:3399121]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3396636 3399586 ZNF274 GTRD no Liver (HepG2) 21839259
chr19 3396636 3399586 ZNF274 GTRD no Liver (HepG2) 108366555
chr19 3396636 3399586 ZNF274 GTRD no Liver (HepG2) 108366556
chr19 3396717 3399219 ZNF274 GTRD no Liver (HepG2) 21839260
chr19 3396717 3399219 ZNF274 GTRD no Liver (HepG2) 108366557
chr19 3396717 3399219 ZNF274 GTRD no Liver (HepG2) 108366558
chr19 3396815 3399352 TCF7L2 GTRD no Colon (HCT116) 21839262
chr19 3396815 3399352 TCF7L2 GTRD no Colon (HCT116) 108366561
chr19 3396815 3399352 TCF7L2 GTRD no Colon (HCT116) 108366562
chr19 3396899 3399356 ZNF274 GTRD no Liver (HepG2) 21839264
chr19 3396899 3399356 ZNF274 GTRD no Liver (HepG2) 108366568
chr19 3396899 3399356 ZNF274 GTRD no Liver (HepG2) 108366569
chr19 3397009 3399140 ZBTB33 GTRD no Lung (A549) 108366572
chr19 3397009 3399140 ZBTB33 GTRD no Lung (A549) 108366573
chr19 3397053 3399143 P63 GTRD no Skin (Keratinocyte) 108366575
chr19 3397053 3399143 P63 GTRD no Skin (Keratinocyte) 108366576
chr19 3397122 3399154 ZNF274 GTRD no Liver (HepG2) 21839268
chr19 3397122 3399154 ZNF274 GTRD no Liver (HepG2) 108366580
chr19 3397122 3399154 ZNF274 GTRD no Liver (HepG2) 108366581
chr19 3397133 3399154 ZNF274 GTRD no Liver (HepG2) 21839269
chr19 3397133 3399154 ZNF274 GTRD no Liver (HepG2) 108366582
chr19 3397133 3399154 ZNF274 GTRD no Liver (HepG2) 108366583
chr19 3397194 3399327 ZNF274 GTRD no Liver (HepG2) 21839274
chr19 3397194 3399327 ZNF274 GTRD no Liver (HepG2) 108366589
chr19 3397194 3399327 ZNF274 GTRD no Liver (HepG2) 108366590
chr19 3397204 3399130 ZNF274 GTRD no Liver (HepG2) 21839277
chr19 3397204 3399130 ZNF274 GTRD no Liver (HepG2) 108366597
chr19 3397204 3399130 ZNF274 GTRD no Liver (HepG2) 108366598
chr19 3397214 3399154 P63 GTRD no Skin (Keratinocyte) 108366599
chr19 3397214 3399154 P63 GTRD no Skin (Keratinocyte) 108366600
chr19 3397215 3399378 TCF7L2 GTRD no Colon (HCT116) 21839278
chr19 3397215 3399378 TCF7L2 GTRD no Colon (HCT116) 108366601
chr19 3397215 3399378 TCF7L2 GTRD no Colon (HCT116) 108366602
chr19 3397216 3399147 ZNF274 GTRD no Liver (HepG2) 21839279
chr19 3397216 3399147 ZNF274 GTRD no Liver (HepG2) 108366603
chr19 3397216 3399147 ZNF274 GTRD no Liver (HepG2) 108366604
chr19 3397303 3399219 P63 GTRD no Skin (Keratinocyte) 108366615
chr19 3397303 3399219 P63 GTRD no Skin (Keratinocyte) 108366616
chr19 3398062 3399130 ZNF274 GTRD no Liver (HepG2) 21839313
chr19 3398062 3399130 ZNF274 GTRD no Liver (HepG2) 108366653
chr19 3398225 3399147 P63 GTRD no Skin (Keratinocyte) 108366654
chr19 3398231 3399258 ZNF143 GTRD no Epithelial (MCF-7) 108366655
chr19 3398325 3399215 TCF7L2 GTRD no Colon (HCT116) 21839316
chr19 3398325 3399215 TCF7L2 GTRD no Colon (HCT116) 108366658
chr19 3398423 3399144 ZNF274 GTRD no Liver (HepG2) 21839319
chr19 3398423 3399144 ZNF274 GTRD no Liver (HepG2) 108366661
chr19 3398487 3399242 ZNF274 GTRD no Liver (HepG2) 21839328
chr19 3398487 3399242 ZNF274 GTRD no Liver (HepG2) 108366670
chr19 3398594 3399135 ZNF274 GTRD no Liver (HepG2) 21839339
chr19 3398594 3399135 ZNF274 GTRD no Liver (HepG2) 108366682
chr19 3398729 3399314 ZBTB33 GTRD no Lung (A549) 108366696
chr19 3399118 3399131 ELF1 JASPAR yes 112128024
chr19 3399121 3399131 GABPA JASPAR yes 112128025
Genes associated with rs111226327[chr19:3399121], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More