EnhancerDB
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  3. rs111328539[chr5:171568990]
Enhancers that have rs111328539[chr5:171568990]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs111328539[chr5:171568990]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171568983 171568995 HES7 JASPAR yes 67767064
chr5 171568984 171568994 HEY2 JASPAR yes 67767065
chr5 171568984 171568994 ID4 JASPAR yes 67767066
chr5 171568984 171568994 TCF4 JASPAR yes 67767067
chr5 171568985 171568994 SNAI2 JASPAR yes 67767068
chr5 171568986 171568991 USF2 TRANSFAC yes 67767069
Genes associated with rs111328539[chr5:171568990], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More