EnhancerDB
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  3. rs111420717[chr1:172885992]
Enhancers that have rs111420717[chr1:172885992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs111420717[chr1:172885992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172882070 172886039 ZNF274 GTRD no Bone Marrow (K562) 107846255
chr1 172885190 172886234 ZNF274 GTRD no Cervix (HeLa-S3) 21350440
chr1 172885274 172886257 ZNF274 GTRD no Cervix (HeLa-S3) 21350441
chr1 172885278 172886593 TCF7L2 GTRD no Colon (HCT116) 21350442
chr1 172885352 172886710 TCF7L2 GTRD no Colon (HCT116) 21350444
chr1 172885360 172886434 TCF7L2 GTRD no Colon (HCT116) 21350445
chr1 172885399 172886238 ZNF274 GTRD no Cervix (HeLa-S3) 21350446
chr1 172885797 172886583 TCF7L2 GTRD no Colon (HCT116) 21350448
chr1 172885797 172886774 TCF7L2 GTRD no Colon (HCT116) 21350449
chr1 172885861 172886423 TCF7L2 GTRD no Colon (HCT116) 21350450
chr1 172885909 172886550 TCF7L2 GTRD no Colon (HCT116) 21350451
chr1 172885942 172886440 ZNF143 GTRD no Epithelial (MCF-7) 21350452
chr1 172885950 172886410 ZBTB33 GTRD no Lung (A549) 21350453
chr1 172885965 172886402 ZNF143 GTRD no Epithelial (MCF-7) 21350454
chr1 172885969 172886573 ZNF143 GTRD no Epithelial (MCF-7) 21350455
Genes associated with rs111420717[chr1:172885992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More