EnhancerDB
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  3. rs111580235[chr6:110855061]
Enhancers that have rs111580235[chr6:110855061]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs111580235[chr6:110855061]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110855055 110855070 HNF4G JASPAR yes 104294945
chr6 110855055 110855070 NR2C2 JASPAR yes 104294946
chr6 110855056 110855070 RXRB JASPAR yes 104294947
chr6 110855056 110855070 RXRG JASPAR yes 104294948
Genes associated with rs111580235[chr6:110855061], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More