EnhancerDB
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  3. rs111654234[chr5:171539418]
Enhancers that have rs111654234[chr5:171539418]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs111654234[chr5:171539418]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171539414 171539435 IRF1 JASPAR yes 67763641
chr5 171539415 171539436 IRF1 JASPAR yes 67763642
chr5 171539416 171539431 PRDM1 JASPAR yes 67763643
chr5 171539416 171539431 STAT2 JASPAR yes 67763644
chr5 171539416 171539437 IRF1 JASPAR yes 67763645
chr5 171539417 171539438 IRF1 JASPAR yes 67763646
chr5 171539418 171539439 IRF1 JASPAR yes 67763647
Genes associated with rs111654234[chr5:171539418], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More