EnhancerDB
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Enhancers that have rs11170353[chr12:53369160]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr12 53368990 53369278 vista13509
VISTA
Transcript factors that have rs11170353[chr12:53369160]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53368688 53369196 ZNF274 GTRD no Cervix (HeLa-S3) 21548542
chr12 53368688 53369196 ZNF274 GTRD no Cervix (HeLa-S3) 108035371
chr12 53368789 53369188 ZNF274 GTRD no Bone Marrow (K562) 21548543
chr12 53368789 53369188 ZNF274 GTRD no Bone Marrow (K562) 108035372
chr12 53368995 53373584 TCF7L2 GTRD no Colon (HCT116) 21548544
chr12 53368995 53373584 TCF7L2 GTRD no Colon (HCT116) 108035373
chr12 53368995 53373584 TCF7L2 GTRD no Colon (HCT116) 108035374
chr12 53369106 53369386 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21548545
chr12 53369106 53369386 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035375
chr12 53369147 53369351 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21548546
chr12 53369147 53369351 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035376
chr12 53369149 53369160 E2F6 JASPAR yes 82408860
chr12 53369149 53369160 E2F6 JASPAR yes 120968973
chr12 53369160 53369420 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21548547
chr12 53369160 53369420 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108035377
Genes associated with rs11170353[chr12:53369160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More