EnhancerDB
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  3. rs111878465[chr12:53368862]
Enhancers that have rs111878465[chr12:53368862]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs111878465[chr12:53368862]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53368324 53368900 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21548539
chr12 53368324 53368900 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035367
chr12 53368386 53368926 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21548540
chr12 53368386 53368926 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035368
chr12 53368419 53368995 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21548541
chr12 53368419 53368995 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035369
chr12 53368419 53368995 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035370
chr12 53368688 53369196 ZNF274 GTRD no Cervix (HeLa-S3) 21548542
chr12 53368688 53369196 ZNF274 GTRD no Cervix (HeLa-S3) 108035371
chr12 53368789 53369188 ZNF274 GTRD no Bone Marrow (K562) 21548543
chr12 53368789 53369188 ZNF274 GTRD no Bone Marrow (K562) 108035372
chr12 53368852 53368864 ZBTB7A JASPAR yes 120968941
Genes associated with rs111878465[chr12:53368862], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 53497302 53518322 + SOAT2 ENSG00000167780.7 53497302 128440 Ovary 0.423683 12111