EnhancerDB
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  3. rs111974952[chr5:171530486]
Enhancers that have rs111974952[chr5:171530486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs111974952[chr5:171530486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171529887 171530563 STAT1 UCSC Txn Factor no Conserved 108537425
chr5 171530483 171530495 TEAD1 JASPAR yes 67762788
chr5 171530485 171530495 TEAD1 JASPAR yes 67762789
chr5 171530485 171530495 TEAD4 JASPAR yes 67762790
chr5 171530486 171530494 TEAD3 JASPAR yes 67762791
Genes associated with rs111974952[chr5:171530486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More