EnhancerDB
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  3. rs111989350[chr1:17877935]
Enhancers that have rs111989350[chr1:17877935]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17869605 17883659 enh26559
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs111989350[chr1:17877935]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17877923 17877935 HES5 JASPAR yes 27100581
chr1 17877923 17877935 HES7 JASPAR yes 27100582
chr1 17877923 17877935 PKNOX2 JASPAR yes 27100583
chr1 17877928 17877937 NFIX JASPAR yes 27100584
chr1 17877928 17877938 NFIA JASPAR yes 27100585
chr1 17877930 17877936 NFIC JASPAR yes 27100586
Genes associated with rs111989350[chr1:17877935], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More