EnhancerDB
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  3. rs112002090[chr1:8162646]
Enhancers that have rs112002090[chr1:8162646]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8147625 8162861 enh11461
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs112002090[chr1:8162646]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8162531 8165141 TEF1 GTRD no Bone (Osteoblast) 21325213
chr1 8162638 8162654 RFX4 JASPAR yes 26512958
chr1 8162646 8162651 GATA2 JASPAR yes 26512959
Genes associated with rs112002090[chr1:8162646], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More