EnhancerDB
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  3. rs11205904[chr1:52360249]
Enhancers that have rs11205904[chr1:52360249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52359912 52371075 enh11849
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs11205904[chr1:52360249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52359633 52360649 TCF7L2 GTRD no Colon (HCT116) 21325381
chr1 52360242 52360256 E2F7 JASPAR yes 28873718
chr1 52360249 52360259 EN2 JASPAR yes 28873719
chr1 52360249 52360259 ESX1 JASPAR yes 28873720
chr1 52360249 52360259 GBX1 JASPAR yes 28873721
chr1 52360249 52360259 GBX2 JASPAR yes 28873722
chr1 52360249 52360259 GSX2 JASPAR yes 28873723
chr1 52360249 52360259 HESX1 JASPAR yes 28873724
chr1 52360249 52360259 LBX2 JASPAR yes 28873725
chr1 52360249 52360259 LHX2 JASPAR yes 28873726
chr1 52360249 52360259 MIXL1 JASPAR yes 28873727
chr1 52360249 52360259 RAX JASPAR yes 28873728
Genes associated with rs11205904[chr1:52360249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More