EnhancerDB
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  3. rs112127087[chr1:202044416]
Enhancers that have rs112127087[chr1:202044416]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs112127087[chr1:202044416]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 21366478
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 107857652
chr1 202044289 202044443 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366479
chr1 202044291 202045012 ZNF143 GTRD no Epithelial (MCF-7) 21366480
chr1 202044311 202044429 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366481
chr1 202044334 202047849 ZNF143 GTRD no Epithelial (MCF-7) 21366482
chr1 202044334 202047849 ZNF143 GTRD no Epithelial (MCF-7) 107857653
chr1 202044356 202044872 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366483
chr1 202044402 202044417 RFX5 JASPAR yes 34550064
Genes associated with rs112127087[chr1:202044416], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More