EnhancerDB
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  3. rs112172402[chr1:154819688]
Enhancers that have rs112172402[chr1:154819688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs112172402[chr1:154819688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154818968 154820822 AR GTRD no Prostate (PC-3) 107833403
chr1 154819109 154820408 ZNF274 GTRD no Bone Marrow (K562) 107833404
chr1 154819110 154820488 ZNF274 GTRD no Cervix (HeLa-S3) 107833405
chr1 154819256 154820326 ZNF143 GTRD no Epithelial (MCF-7) 107833406
chr1 154819270 154820431 ZBTB33 GTRD no Lung (A549) 107833407
chr1 154819282 154820798 ZNF274 GTRD no Blood (GM12878) 21340735
chr1 154819282 154820798 ZNF274 GTRD no Blood (GM12878) 107833408
chr1 154819319 154820310 ZNF143 GTRD no Epithelial (MCF-7) 107833409
chr1 154819358 154820424 ZNF143 GTRD no Epithelial (MCF-7) 107833410
chr1 154819383 154820547 ZNF143 GTRD no Epithelial (MCF-7) 107833411
chr1 154819408 154820990 ZNF274 GTRD no Blood (GM12878) 21340736
chr1 154819408 154820990 ZNF274 GTRD no Blood (GM12878) 107833412
chr1 154819437 154820382 ZBTB33 GTRD no Lung (A549) 107833413
chr1 154819439 154820464 ZNF143 GTRD no Epithelial (MCF-7) 107833414
chr1 154819442 154820433 ZNF143 GTRD no Epithelial (MCF-7) 107833415
chr1 154819495 154821089 ZNF274 GTRD no Blood (GM12878) 21340737
chr1 154819495 154821089 ZNF274 GTRD no Blood (GM12878) 107833416
chr1 154819579 154820354 ZNF274 GTRD no Cervix (HeLa-S3) 107833417
chr1 154819673 154819694 ZNF263 JASPAR yes 32318233
chr1 154819678 154819693 ZIC3 JASPAR yes 32318234
chr1 154819678 154819693 ZIC4 JASPAR yes 32318235
chr1 154819679 154819689 SP1 JASPAR yes 32318236
chr1 154819679 154819689 ZNF740 JASPAR yes 32318237
chr1 154819680 154819690 ZNF740 JASPAR yes 32318238
chr1 154819681 154819695 PLAG1 JASPAR yes 32318239
chr1 154819681 154819696 NR2C2 JASPAR yes 32318240
chr1 154819686 154819701 TFAP2C JASPAR yes 32318241
chr1 154819688 154819700 TFAP2A JASPAR yes 32318242
chr1 154819688 154819700 TFAP2B JASPAR yes 32318243
chr1 154819688 154819700 TFAP2C JASPAR yes 32318244
chr1 154819688 154819703 TFAP2A JASPAR yes 32318245
chr1 154819688 154819703 TFAP2C JASPAR yes 32318246
Genes associated with rs112172402[chr1:154819688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More