EnhancerDB
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Enhancers that have rs112180556[chr17:79695459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs112180556[chr17:79695459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79694572 79696980 TCF7L2 GTRD no Colon (HCT116) 21798278
chr17 79694592 79695537 ZNF143 GTRD no Epithelial (MCF-7) 21798279
chr17 79694600 79695493 ZNF143 GTRD no Epithelial (MCF-7) 21798280
chr17 79694606 79697345 TCF7L2 GTRD no Colon (HCT116) 21798281
chr17 79694625 79696438 ZNF143 GTRD no Epithelial (MCF-7) 21798282
chr17 79694658 79696965 TCF7L2 GTRD no Colon (HCT116) 21798284
chr17 79694808 79696000 TCF7L2 GTRD no Colon (HCT116) 21798289
chr17 79694870 79695889 TCF7L2 GTRD no Colon (HCT116) 21798290
chr17 79695114 79696462 ZNF143 GTRD no Epithelial (MCF-7) 21798293
chr17 79695449 79695460 FOSL2 JASPAR yes 56340020
chr17 79695453 79696441 ZNF143 GTRD no Epithelial (MCF-7) 21798294
chr17 79695455 79696490 ZNF143 GTRD no Epithelial (MCF-7) 21798295
chr17 79695457 79695466 ZEB1 JASPAR yes 56340021
chr17 79695458 79695468 ID4 JASPAR yes 56340022
chr17 79695458 79695468 TCF3 JASPAR yes 56340023
chr17 79695458 79695468 TCF4 JASPAR yes 56340024
Genes associated with rs112180556[chr17:79695459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More