EnhancerDB
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Enhancers that have rs112212172[chr17:80466654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs112212172[chr17:80466654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80465637 80466835 ZNF143 GTRD no Epithelial (MCF-7) 21800708
chr17 80465648 80466877 ZNF143 GTRD no Epithelial (MCF-7) 21800710
chr17 80466185 80466900 TCF7L2 GTRD no Colon (HCT116) 21800713
chr17 80466220 80466881 ZNF143 GTRD no Epithelial (MCF-7) 21800715
chr17 80466235 80466903 TCF7L2 GTRD no Colon (HCT116) 21800716
chr17 80466540 80466887 TCF7L2 GTRD no Colon (HCT116) 21800719
chr17 80466566 80469395 ZNF274 GTRD no Bone Marrow (K562) 21800720
chr17 80466639 80466658 PAX5 JASPAR yes 56369455
chr17 80466648 80466658 SP1 JASPAR yes 56369456
chr17 80466652 80466666 GLIS3 JASPAR yes 56369457
Genes associated with rs112212172[chr17:80466654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More