EnhancerDB
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  3. rs112232948[chr16:1341029]
Enhancers that have rs112232948[chr16:1341029]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr16 1341001 1341384 vista21545
VISTA
Transcript factors that have rs112232948[chr16:1341029]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 21684544
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171314
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171315
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171316
chr16 1340356 1341041 ZNF274 GTRD no Blood (GM12878) 108171332
chr16 1340678 1341116 ZNF274 GTRD no Blood (GM12878) 108171333
chr16 1340720 1341910 TCF7L2 GTRD no Colon (HCT116) 21684582
chr16 1340720 1341910 TCF7L2 GTRD no Colon (HCT116) 108171334
chr16 1340787 1341443 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21684583
chr16 1340787 1341443 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108171335
chr16 1340801 1345571 TCF7L2 GTRD no Colon (HCT116) 21684584
chr16 1340801 1345571 TCF7L2 GTRD no Colon (HCT116) 108171336
chr16 1340801 1345571 TCF7L2 GTRD no Colon (HCT116) 108171337
chr16 1340827 1341227 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108171338
chr16 1340906 1341282 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21684585
chr16 1340906 1341282 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108171339
chr16 1340921 1341211 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21684586
chr16 1340921 1341211 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108171340
chr16 1340953 1344322 TCF7L2 GTRD no Colon (HCT116) 21684587
chr16 1340953 1344322 TCF7L2 GTRD no Colon (HCT116) 108171341
chr16 1340988 1341122 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21684588
chr16 1340988 1341122 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108171342
chr16 1341015 1341704 TCF7L2 GTRD no Colon (HCT116) 21684589
chr16 1341015 1341704 TCF7L2 GTRD no Colon (HCT116) 108171343
chr16 1341016 1341110 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21684590
chr16 1341016 1341110 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108171344
chr16 1341017 1341030 NR2F1 JASPAR yes 9148669
chr16 1341017 1341030 NR2F1 JASPAR yes 49326522
chr16 1341017 1341153 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108171345
chr16 1341019 1341030 ESRRA JASPAR yes 9148670
chr16 1341019 1341030 ESRRB JASPAR yes 9148671
chr16 1341019 1341030 ESRRA JASPAR yes 49326523
chr16 1341019 1341030 ESRRB JASPAR yes 49326524
chr16 1341020 1341035 HNF4A JASPAR yes 9148673
chr16 1341020 1341035 HNF4A JASPAR yes 49326526
chr16 1341021 1341035 NR2F1 JASPAR yes 9148674
chr16 1341021 1341035 RXRB JASPAR yes 9148675
chr16 1341021 1341035 RXRG JASPAR yes 9148676
chr16 1341021 1341035 NR2F1 JASPAR yes 49326527
chr16 1341021 1341035 RXRB JASPAR yes 49326528
chr16 1341021 1341035 RXRG JASPAR yes 49326529
chr16 1341021 1341036 HNF4G JASPAR yes 9148677
chr16 1341021 1341036 HNF4G JASPAR yes 49326530
Genes associated with rs112232948[chr16:1341029], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More