EnhancerDB
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  3. rs112241375[chr6:41686413]
Enhancers that have rs112241375[chr6:41686413]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 41686086 41686432 vista51931
VISTA
Transcript factors that have rs112241375[chr6:41686413]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41686401 41686422 IRF1 JASPAR yes 70363276
chr6 41686401 41686422 IRF1 JASPAR yes 101668864
chr6 41686402 41686423 IRF1 JASPAR yes 70363277
chr6 41686402 41686423 IRF1 JASPAR yes 101668865
chr6 41686403 41686424 IRF1 JASPAR yes 70363278
chr6 41686403 41686424 IRF1 JASPAR yes 101668866
chr6 41686407 41686428 IRF1 JASPAR yes 70363280
chr6 41686407 41686428 IRF1 JASPAR yes 101668868
chr6 41686408 41686423 FOXP1 JASPAR yes 70363281
chr6 41686408 41686423 FOXP1 JASPAR yes 101668869
chr6 41686408 41686429 IRF1 JASPAR yes 70363282
chr6 41686408 41686429 IRF1 JASPAR yes 101668870
chr6 41686409 41686430 IRF1 JASPAR yes 70363283
chr6 41686409 41686430 IRF1 JASPAR yes 101668871
chr6 41686410 41686425 FOXP1 JASPAR yes 70363284
chr6 41686410 41686425 FOXP1 JASPAR yes 101668872
chr6 41686410 41686431 IRF1 JASPAR yes 70363285
chr6 41686410 41686431 IRF1 JASPAR yes 101668873
chr6 41686412 41686427 FOXP1 JASPAR yes 70363286
chr6 41686412 41686427 FOXP1 JASPAR yes 101668874
chr6 41686413 41686428 FOXP1 JASPAR yes 70363287
chr6 41686413 41686428 FOXP1 JASPAR yes 101668875
Genes associated with rs112241375[chr6:41686413], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More