EnhancerDB
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  3. rs112281209[chr1:202054935]
Enhancers that have rs112281209[chr1:202054935]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs112281209[chr1:202054935]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 21366717
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857734
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857735
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857736
chr1 202054606 202059238 ZNF143 GTRD no Epithelial (MCF-7) 21366731
chr1 202054606 202059238 ZNF143 GTRD no Epithelial (MCF-7) 107857746
chr1 202054606 202059238 ZNF143 GTRD no Epithelial (MCF-7) 107857747
chr1 202054618 202055379 ZNF143 GTRD no Epithelial (MCF-7) 21366732
chr1 202054618 202055379 ZNF143 GTRD no Epithelial (MCF-7) 107857748
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 21366733
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 107857749
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 107857750
chr1 202054729 202055048 TCF7L2 GTRD no Colon (HCT116) 21366734
chr1 202054753 202055117 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366735
chr1 202054753 202055117 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857751
chr1 202054753 202055129 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366736
chr1 202054753 202055129 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857752
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 21366737
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 107857753
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 107857754
chr1 202054841 202056490 TCF7L2 GTRD no Colon (HCT116) 21366738
chr1 202054841 202056490 TCF7L2 GTRD no Colon (HCT116) 107857755
chr1 202054841 202056490 TCF7L2 GTRD no Colon (HCT116) 107857756
chr1 202054888 202055468 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107857757
chr1 202054913 202055333 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366739
chr1 202054913 202055333 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857758
chr1 202054928 202055426 ZNF274 GTRD no Bone Marrow (K562) 21366740
chr1 202054928 202055426 ZNF274 GTRD no Bone Marrow (K562) 107857759
chr1 202054931 202054935 YY1 TRANSFAC yes 34551603
chr1 202054935 202054940 TFAP2A TRANSFAC yes 34551604
chr1 202054935 202054941 MZF1 JASPAR yes 34551605
Genes associated with rs112281209[chr1:202054935], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More