EnhancerDB
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  3. rs112295086[chr17:70372727]
Enhancers that have rs112295086[chr17:70372727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs112295086[chr17:70372727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70372626 70372962 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21784375
chr17 70372640 70372996 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21784376
chr17 70372654 70372928 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21784377
chr17 70372661 70372917 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21784378
chr17 70372709 70372729 RREB1 JASPAR yes 55779789
chr17 70372719 70372739 RREB1 JASPAR yes 55779790
chr17 70372723 70372743 RREB1 JASPAR yes 55779791
chr17 70372727 70372747 RREB1 JASPAR yes 55779792
Genes associated with rs112295086[chr17:70372727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More