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- rs112338539[chr18:54235594]
Enhancers that have rs112338539[chr18:54235594]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr18 |
54228885 |
54236175 |
enh44581 |
|
|
Transcript factors that have rs112338539[chr18:54235594]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr18
|
54235385
|
54236743
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108337522
|
|
|
chr18
|
54235395
|
54236481
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108337523
|
|
|
chr18
|
54235408
|
54236529
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108337524
|
|
|
chr18
|
54235473
|
54236481
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108337525
|
|
|
chr18
|
54235524
|
54236753
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
21823282
|
|
|
chr18
|
54235524
|
54236753
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108337526
|
|
|
chr18
|
54235556
|
54236724
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108337527
|
|
|
chr18
|
54235566
|
54236610
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108337528
|
|
|
chr18
|
54235584
|
54235603
|
PAX5
|
JASPAR
|
yes
|
|
110847145
|
|
|
chr18
|
54235589
|
54235608
|
REST
|
JASPAR
|
yes
|
|
110847146
|
|
|
chr18
|
54235591
|
54235600
|
HIC2
|
JASPAR
|
yes
|
|
110847147
|
|
|
chr18
|
54235592
|
54235612
|
TP53
|
JASPAR
|
yes
|
|
110847148
|
|
|
chr18
|
54235594
|
54235598
|
LFA1
|
TRANSFAC
|
yes
|
|
110847149
|
|
Genes associated with rs112338539[chr18:54235594], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |