EnhancerDB
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  3. rs112405713[chr5:171574341]
Enhancers that have rs112405713[chr5:171574341]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs112405713[chr5:171574341]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171574327 171574345 NFYA JASPAR yes 67767836
chr5 171574334 171574355 IRF1 JASPAR yes 67767837
chr5 171574336 171574346 NFATC3 JASPAR yes 67767839
chr5 171574338 171574345 NFATC2 JASPAR yes 67767840
Genes associated with rs112405713[chr5:171574341], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More