EnhancerDB
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  3. rs112542289[chr1:26222260]
Enhancers that have rs112542289[chr1:26222260]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 26213205 26226323 enh11640
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus
Transcript factors that have rs112542289[chr1:26222260]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 26222253 26222268 TFAP2C JASPAR yes 27612426
chr1 26222254 26222268 TLX1 JASPAR yes 27612427
chr1 26222255 26222269 TLX1 JASPAR yes 27612428
Genes associated with rs112542289[chr1:26222260], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More