EnhancerDB
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  3. rs112598023[chr6:17718129]
Enhancers that have rs112598023[chr6:17718129]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17712332 17727615 enh23084
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs112598023[chr6:17718129]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17718123 17718132 NFIX JASPAR yes 100396478
chr6 17718123 17718143 TBX19 JASPAR yes 100396479
chr6 17718124 17718130 NFIC JASPAR yes 100396480
chr6 17718129 17718141 PKNOX2 JASPAR yes 100396481
Genes associated with rs112598023[chr6:17718129], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More