EnhancerDB
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  3. rs11259972[chr16:88333296]
Enhancers that have rs11259972[chr16:88333296]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88327201 88357367 enh16902
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus
Transcript factors that have rs11259972[chr16:88333296]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88329349 88336233 ZBTB33 GTRD no Lung (A549) 21735886
chr16 88329477 88337057 ZBTB33 GTRD no Lung (A549) 21735887
chr16 88329704 88335103 ZBTB33 GTRD no Lung (A549) 21735888
chr16 88330003 88333362 ZBTB33 GTRD no Lung (A549) 21735891
chr16 88330489 88333359 ZBTB33 GTRD no Lung (A549) 21735892
chr16 88330491 88335363 ZBTB33 GTRD no Lung (A549) 21735893
chr16 88330687 88333390 ZBTB33 GTRD no Lung (A549) 21735894
chr16 88330781 88333370 ZBTB33 GTRD no Lung (A549) 21735895
chr16 88330871 88335390 ZNF274 GTRD no Cervix (HeLa-S3) 21735896
chr16 88330973 88333348 ZBTB33 GTRD no Lung (A549) 21735897
chr16 88331108 88333382 ZBTB33 GTRD no Lung (A549) 21735898
chr16 88331354 88333363 ZBTB33 GTRD no Lung (A549) 21735899
chr16 88331438 88333400 ZBTB33 GTRD no Lung (A549) 21735900
chr16 88331514 88333393 ZNF274 GTRD no Cervix (HeLa-S3) 21735901
chr16 88331576 88333392 ZBTB33 GTRD no Lung (A549) 21735902
chr16 88331628 88334100 ZBTB33 GTRD no Lung (A549) 21735904
chr16 88331705 88333751 ZBTB33 GTRD no Lung (A549) 21735906
chr16 88331706 88333606 ZNF274 GTRD no Cervix (HeLa-S3) 21735907
chr16 88331731 88333369 ZBTB33 GTRD no Lung (A549) 21735910
chr16 88331737 88333849 ZBTB33 GTRD no Lung (A549) 21735911
chr16 88331745 88333970 ZNF274 GTRD no Cervix (HeLa-S3) 21735912
chr16 88331747 88333369 ZBTB33 GTRD no Lung (A549) 21735913
chr16 88331754 88333371 ZBTB33 GTRD no Brain (SK-N-SH) 21735914
chr16 88331758 88333341 ZBTB33 GTRD no Lung (A549) 21735915
chr16 88331777 88333353 ZBTB33 GTRD no Lung (A549) 21735920
chr16 88331785 88333358 ZBTB33 GTRD no Lung (A549) 21735923
chr16 88331788 88333354 ZBTB33 GTRD no Lung (A549) 21735924
chr16 88331792 88333381 ZBTB33 GTRD no Lung (A549) 21735927
chr16 88331815 88333373 ZBTB33 GTRD no Lung (A549) 21735931
chr16 88331824 88333354 ZNF274 GTRD no Cervix (HeLa-S3) 21735932
chr16 88331841 88333379 ZBTB33 GTRD no Lung (A549) 21735940
chr16 88331856 88333379 ZBTB33 GTRD no Lung (A549) 21735945
chr16 88331876 88333369 ZNF274 GTRD no Cervix (HeLa-S3) 21735949
chr16 88331955 88333349 ZBTB33 GTRD no Lung (A549) 21735959
chr16 88331967 88333337 ZBTB33 GTRD no Lung (A549) 21735962
chr16 88331978 88333364 ZBTB33 GTRD no Lung (A549) 21735963
chr16 88332041 88333380 ZBTB33 GTRD no Lung (A549) 21735967
chr16 88332709 88333359 ZNF274 GTRD no Cervix (HeLa-S3) 21735972
chr16 88332925 88333360 ZNF274 GTRD no Cervix (HeLa-S3) 21735973
chr16 88332941 88333301 ZNF274 GTRD no Cervix (HeLa-S3) 21735974
chr16 88333287 88333306 PAX5 JASPAR yes 12275510
chr16 88333288 88333297 ZEB1 JASPAR yes 12275511
chr16 88333289 88333299 FIGLA JASPAR yes 12275512
chr16 88333289 88333299 TCF4 JASPAR yes 12275513
chr16 88333291 88333296 USF2 TRANSFAC yes 12275514
Genes associated with rs11259972[chr16:88333296], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More