EnhancerDB
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  3. rs112662894[chr1:55418738]
Enhancers that have rs112662894[chr1:55418738]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55413725 55423635 enh11878
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Pancreas Muscle (Myotube) Uterus Heart
chr1 55418708 55418921 vista1676
VISTA
Transcript factors that have rs112662894[chr1:55418738]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55418528 55419004 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805395
chr1 55418615 55419005 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805396
chr1 55418633 55419029 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805397
chr1 55418659 55418979 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805398
chr1 55418717 55418981 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805399
chr1 55418728 55418738 NFKB1 JASPAR yes 29009848
chr1 55418728 55418738 NFKB1 JASPAR yes 118293751
chr1 55418728 55418992 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805400
chr1 55418728 55419004 USF1 UCSC Txn Factor no Conserved 107805401
chr1 55418731 55418742 HOXC13 JASPAR yes 29009849
chr1 55418731 55418742 HOXC13 JASPAR yes 118293752
chr1 55418731 55418746 STAT1 JASPAR yes 29009850
chr1 55418731 55418746 STAT1 JASPAR yes 118293753
chr1 55418733 55418744 STAT1 JASPAR yes 29009851
chr1 55418733 55418744 STAT1 JASPAR yes 118293754
chr1 55418735 55418750 FOXP1 JASPAR yes 29009852
chr1 55418735 55418750 FOXP1 JASPAR yes 118293755
chr1 55418738 55418749 FOXP2 JASPAR yes 29009853
chr1 55418738 55418749 FOXP2 JASPAR yes 118293756
Genes associated with rs112662894[chr1:55418738], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More