EnhancerDB
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  3. rs112778478[chr1:228074033]
Enhancers that have rs112778478[chr1:228074033]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228069592 228093895 enh12737
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung Stomach Placenta Breast Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs112778478[chr1:228074033]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228072370 228074595 TCF7L2 GTRD no Colon (HCT116) 107876769
chr1 228072579 228074663 TCF7L2 GTRD no Colon (HCT116) 107876772
chr1 228072843 228074594 TCF7L2 GTRD no Colon (HCT116) 107876773
chr1 228072913 228074553 TCF7L2 GTRD no Colon (HCT116) 107876774
chr1 228072920 228074595 ZNF143 GTRD no Epithelial (MCF-7) 21388236
chr1 228072920 228074595 ZNF143 GTRD no Epithelial (MCF-7) 107876775
chr1 228073205 228074628 ZNF143 GTRD no Epithelial (MCF-7) 21388237
chr1 228073205 228074628 ZNF143 GTRD no Epithelial (MCF-7) 107876777
chr1 228073229 228074677 ZNF274 GTRD no Bone Marrow (K562) 21388238
chr1 228073229 228074677 ZNF274 GTRD no Bone Marrow (K562) 107876778
chr1 228073280 228074467 ZNF274 GTRD no Bone Marrow (K562) 21388240
chr1 228073477 228074589 ZNF143 GTRD no Epithelial (MCF-7) 21388246
chr1 228073493 228074463 ZNF274 GTRD no Bone Marrow (K562) 21388249
chr1 228073499 228074601 ZNF143 GTRD no Epithelial (MCF-7) 21388251
chr1 228073551 228074394 ZNF274 GTRD no Bone Marrow (K562) 21388253
chr1 228073598 228074355 ZNF274 GTRD no Cervix (HeLa-S3) 21388255
chr1 228073654 228074230 ZNF274 GTRD no Bone Marrow (K562) 21388256
chr1 228073654 228074259 ZNF274 GTRD no Bone Marrow (K562) 21388257
chr1 228073693 228074496 ZNF143 GTRD no Epithelial (MCF-7) 21388258
chr1 228073724 228074379 ZNF274 GTRD no Bone Marrow (K562) 21388259
chr1 228073725 228074432 ZNF274 GTRD no Bone Marrow (K562) 21388260
chr1 228073738 228074786 ZNF274 GTRD no Bone Marrow (K562) 21388261
chr1 228073783 228074332 ZNF274 GTRD no Bone Marrow (K562) 21388262
chr1 228073787 228074239 ZNF274 GTRD no Bone Marrow (K562) 21388263
chr1 228073789 228074234 ZNF274 GTRD no Bone Marrow (K562) 21388264
chr1 228073789 228074361 ZNF143 GTRD no Epithelial (MCF-7) 21388265
chr1 228073795 228074241 ZNF143 GTRD no Epithelial (MCF-7) 21388266
chr1 228073803 228074296 ZNF274 GTRD no Bone Marrow (K562) 21388267
chr1 228073807 228074259 ZNF274 GTRD no Cervix (HeLa-S3) 21388268
chr1 228073843 228074224 ZNF274 GTRD no Cervix (HeLa-S3) 21388269
chr1 228073861 228074275 ZNF274 GTRD no Bone Marrow (K562) 21388270
chr1 228073878 228074344 ZNF274 GTRD no Bone Marrow (K562) 21388271
chr1 228073885 228074154 ZNF143 GTRD no Epithelial (MCF-7) 21388272
chr1 228073904 228074152 ZNF274 GTRD no Bone Marrow (K562) 21388273
chr1 228073907 228074133 CTCF GTRD no Lung 21388274
chr1 228073909 228074142 ZNF143 GTRD no Epithelial (MCF-7) 21388275
chr1 228073922 228074297 ZNF143 GTRD no Epithelial (MCF-7) 21388276
chr1 228073945 228074264 ZNF274 GTRD no Cervix (HeLa-S3) 21388277
chr1 228073982 228074224 ZNF274 GTRD no Bone Marrow (K562) 21388278
chr1 228074022 228074037 TFAP2A JASPAR yes 35890488
chr1 228074028 228074046 RARA JASPAR yes 35890489
Genes associated with rs112778478[chr1:228074033], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More