EnhancerDB
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  3. rs112823016[chr17:78847392]
Enhancers that have rs112823016[chr17:78847392]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs112823016[chr17:78847392]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78847167 78847767 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797458
chr17 78847167 78847767 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308015
chr17 78847235 78847579 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797459
chr17 78847235 78847579 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308016
chr17 78847273 78847597 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797460
chr17 78847273 78847597 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308017
chr17 78847310 78847560 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797461
chr17 78847310 78847560 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308018
chr17 78847340 78847860 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797462
chr17 78847340 78847860 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308019
chr17 78847379 78847398 RFX2 JASPAR yes 56288314
chr17 78847385 78847400 RFX5 JASPAR yes 56288315
chr17 78847391 78847401 SP1 JASPAR yes 56288316
Genes associated with rs112823016[chr17:78847392], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More