EnhancerDB
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  3. rs112907829[chr12:49279153]
Enhancers that have rs112907829[chr12:49279153]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 49273705 49285739 enh29564
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Lung (A549) Stomach Lung (PC-9) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs112907829[chr12:49279153]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 49274451 49280808 ZNF143 GTRD no Epithelial (MCF-7) 21544296
chr12 49274451 49280808 ZNF143 GTRD no Epithelial (MCF-7) 108029562
chr12 49274451 49280808 ZNF143 GTRD no Epithelial (MCF-7) 108029563
chr12 49275917 49279482 ZNF143 GTRD no Epithelial (MCF-7) 21544311
chr12 49275917 49279482 ZNF143 GTRD no Epithelial (MCF-7) 108029576
chr12 49275917 49279482 ZNF143 GTRD no Epithelial (MCF-7) 108029577
chr12 49278741 49279441 ZNF143 GTRD no Epithelial (MCF-7) 21544348
chr12 49278754 49279195 ZNF143 GTRD no Epithelial (MCF-7) 21544349
chr12 49278766 49279343 ZNF143 GTRD no Epithelial (MCF-7) 21544350
chr12 49278769 49279418 ZNF143 GTRD no Epithelial (MCF-7) 21544351
chr12 49278780 49279269 ZNF143 GTRD no Epithelial (MCF-7) 21544352
chr12 49278780 49279343 ZNF143 GTRD no Epithelial (MCF-7) 21544353
chr12 49278796 49279231 ZNF143 GTRD no Epithelial (MCF-7) 21544355
chr12 49278797 49279288 ZNF143 GTRD no Epithelial (MCF-7) 21544356
chr12 49278798 49279221 ZNF143 GTRD no Epithelial (MCF-7) 21544357
chr12 49279147 49279156 HIC2 JASPAR yes 120753334
chr12 49279150 49279154 LFA1 TRANSFAC yes 120753335
chr12 49279151 49279161 ID4 JASPAR yes 120753336
chr12 49279151 49279161 TCF3 JASPAR yes 120753337
chr12 49279151 49279161 TCF4 JASPAR yes 120753338
chr12 49279152 49279161 SNAI2 JASPAR yes 120753339
chr12 49279153 49279158 USF2 TRANSFAC yes 120753340
Genes associated with rs112907829[chr12:49279153], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More