EnhancerDB
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  3. rs11298971[chr17:33413501]
Enhancers that have rs11298971[chr17:33413501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 33404685 33414376 enh4367
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Brain (SK-N-SH) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs11298971[chr17:33413501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 33413494 33413504 ALX3 JASPAR yes 53995487
chr17 33413494 33413504 GSX2 JASPAR yes 53995488
chr17 33413494 33413504 MIXL1 JASPAR yes 53995489
chr17 33413495 33413503 ISX JASPAR yes 53995490
chr17 33413495 33413503 LHX9 JASPAR yes 53995491
chr17 33413495 33413503 LMX1B JASPAR yes 53995492
chr17 33413495 33413503 PRRX1 JASPAR yes 53995493
chr17 33413495 33413503 RAX2 JASPAR yes 53995494
chr17 33413495 33413503 SHOX JASPAR yes 53995495
chr17 33413495 33413503 UNCX JASPAR yes 53995496
chr17 33413496 33413511 FOXP1 JASPAR yes 53995497
chr17 33413496 33413517 IRF1 JASPAR yes 53995498
chr17 33413498 33413513 FOXP1 JASPAR yes 53995499
chr17 33413499 33413514 FOXP1 JASPAR yes 53995500
chr17 33413500 33413506 TBP TRANSFAC yes 53995501
chr17 33413500 33413515 FOXP1 JASPAR yes 53995502
chr17 33413501 33413516 FOXP1 JASPAR yes 53995503
chr17 33413501 33413522 IRF1 JASPAR yes 53995504
Genes associated with rs11298971[chr17:33413501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More