EnhancerDB
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Enhancers that have rs112999346[chr1:156472500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 156472305 156489855 enh43055
Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Blood (GM12878) Stomach Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs112999346[chr1:156472500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 156470912 156472842 ZNF143 GTRD no Epithelial (MCF-7) 107836481
chr1 156470917 156472777 ZNF143 GTRD no Epithelial (MCF-7) 107836482
chr1 156471112 156472739 ZNF143 GTRD no Epithelial (MCF-7) 107836483
chr1 156471230 156472719 ZNF143 GTRD no Epithelial (MCF-7) 107836484
chr1 156471233 156472705 ZNF143 GTRD no Epithelial (MCF-7) 107836485
chr1 156471259 156472700 ZNF143 GTRD no Epithelial (MCF-7) 107836486
chr1 156471332 156472733 ZNF143 GTRD no Epithelial (MCF-7) 107836487
chr1 156472172 156472551 ZNF274 GTRD no Blood (GM12878) 21342276
chr1 156472350 156474003 POLR2A UCSC Txn Factor no Conserved 107836488
chr1 156472350 156474003 POLR2A UCSC Txn Factor no Conserved 107836489
chr1 156472435 156472711 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21342277
chr1 156472435 156472711 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107836490
chr1 156472491 156473498 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21342278
chr1 156472491 156473498 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107836491
chr1 156472491 156473498 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107836492
chr1 156472493 156472507 PLAG1 JASPAR yes 32392335
chr1 156472497 156472513 GLIS1 JASPAR yes 32392336
chr1 156472499 156472509 SP1 JASPAR yes 32392337
chr1 156472499 156472509 ZNF740 JASPAR yes 32392338
chr1 156472500 156472510 ZNF740 JASPAR yes 32392339
Genes associated with rs112999346[chr1:156472500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 156611182 156629324 + BCAN ENSG00000132692.14 156611182 138682 Esophagus 0.0997618 1375