EnhancerDB
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  3. rs11315962[chr18:51772261]
Enhancers that have rs11315962[chr18:51772261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51771109 51790535 enh4844
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs11315962[chr18:51772261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51772242 51772263 IRF1 JASPAR yes 110710590
chr18 51772243 51772264 ZNF263 JASPAR yes 110710591
chr18 51772246 51772267 IRF1 JASPAR yes 110710594
chr18 51772247 51772262 FOXP1 JASPAR yes 110710595
chr18 51772251 51772272 IRF1 JASPAR yes 110710596
chr18 51772253 51772268 PRDM1 JASPAR yes 110710597
chr18 51772253 51772268 STAT2 JASPAR yes 110710598
chr18 51772254 51772268 SPIC JASPAR yes 110710599
chr18 51772254 51772268 STAT1 JASPAR yes 110710600
chr18 51772255 51772276 IRF1 JASPAR yes 110710601
chr18 51772256 51772271 FOXP1 JASPAR yes 110710602
chr18 51772256 51772277 IRF1 JASPAR yes 110710603
chr18 51772257 51772278 IRF1 JASPAR yes 110710604
chr18 51772258 51772273 FOXP1 JASPAR yes 110710605
chr18 51772258 51772279 IRF1 JASPAR yes 110710606
chr18 51772260 51772275 FOXP1 JASPAR yes 110710607
chr18 51772261 51772276 FOXP1 JASPAR yes 110710608
Genes associated with rs11315962[chr18:51772261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More