EnhancerDB
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  3. rs113173354[chr1:232705342]
Enhancers that have rs113173354[chr1:232705342]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232703025 232718279 enh47311
Prostate (PC-3) Epithelial (MCF-7) Brain (SK-N-MC) Blood (T-cell) Esophagus Lung Blood (OCI-LY7) Stomach Muscle (A673) Peripheral Blood (MM.1S) Adrenal Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs113173354[chr1:232705342]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232704214 232708024 AR GTRD no Prostate (PC-3) 21392237
chr1 232704510 232705370 ZNF143 GTRD no Epithelial (MCF-7) 21392238
chr1 232704519 232705393 ZNF143 GTRD no Epithelial (MCF-7) 21392239
chr1 232704533 232705455 ZNF143 GTRD no Epithelial (MCF-7) 21392240
chr1 232705335 232705345 SREBF1 JASPAR yes 36172076
chr1 232705335 232705345 SREBF2 JASPAR yes 36172077
chr1 232705342 232705360 RARA JASPAR yes 36172078
Genes associated with rs113173354[chr1:232705342], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More