EnhancerDB
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  3. rs11331488[chr12:46550562]
Enhancers that have rs11331488[chr12:46550562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs11331488[chr12:46550562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46546181 46550702 ZNF274 GTRD no Cervix (HeLa-S3) 21540604
chr12 46549242 46550958 ZNF274 GTRD no Cervix (HeLa-S3) 21540670
chr12 46549399 46550814 ZBTB33 GTRD no Lung (A549) 21540671
chr12 46549402 46550594 ZNF274 GTRD no Cervix (HeLa-S3) 21540672
chr12 46549408 46550774 ZBTB33 GTRD no Lung (A549) 21540673
chr12 46549427 46551942 ZNF274 GTRD no Cervix (HeLa-S3) 21540674
chr12 46549443 46552644 ZNF274 GTRD no Cervix (HeLa-S3) 21540676
chr12 46549452 46551820 ZNF274 GTRD no Cervix (HeLa-S3) 21540677
chr12 46549467 46550906 ZNF274 GTRD no Cervix (HeLa-S3) 21540679
chr12 46549473 46550925 ZNF274 GTRD no Cervix (HeLa-S3) 21540680
chr12 46549510 46552088 ZBTB33 GTRD no Lung (A549) 21540683
chr12 46549577 46550675 ZBTB33 GTRD no Lung (A549) 21540689
chr12 46550495 46551082 ZNF274 GTRD no Cervix (HeLa-S3) 21540711
chr12 46550551 46550566 RUNX2 JASPAR yes 120599260
chr12 46550555 46550567 IRF1 JASPAR yes 120599261
chr12 46550556 46550577 IRF1 JASPAR yes 120599262
chr12 46550557 46550577 RREB1 JASPAR yes 120599263
chr12 46550557 46550578 IRF1 JASPAR yes 120599264
chr12 46550558 46550573 STAT2 JASPAR yes 120599265
chr12 46550562 46550577 FOXP1 JASPAR yes 120599266
chr12 46550562 46550582 RREB1 JASPAR yes 120599267
chr12 46550562 46550583 IRF1 JASPAR yes 120599268
Genes associated with rs11331488[chr12:46550562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More