EnhancerDB
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  3. rs113353639[chr12:46558396]
Enhancers that have rs113353639[chr12:46558396]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs113353639[chr12:46558396]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46553200 46558410 ZBTB33 GTRD no Brain (SK-N-SH) 21540745
chr12 46554786 46558559 ZNF274 GTRD no Cervix (HeLa-S3) 21540788
chr12 46554908 46558619 ZNF274 GTRD no Cervix (HeLa-S3) 21540789
chr12 46555317 46558980 ZNF274 GTRD no Cervix (HeLa-S3) 21540811
chr12 46555372 46558513 ZNF274 GTRD no Cervix (HeLa-S3) 21540818
chr12 46555405 46558516 ZNF274 GTRD no Cervix (HeLa-S3) 21540822
chr12 46555417 46558588 ZNF274 GTRD no Cervix (HeLa-S3) 21540824
chr12 46555766 46558477 TCF7L2 GTRD no Colon (HCT116) 21540832
chr12 46556729 46559078 ZNF274 GTRD no Cervix (HeLa-S3) 21540861
chr12 46557823 46560445 P63 GTRD no Skin (Keratinocyte) 21540883
chr12 46557867 46560415 P63 GTRD no Skin (Keratinocyte) 21540884
chr12 46557872 46558442 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21540885
chr12 46557884 46558433 TCF7L2 GTRD no Colon (HCT116) 21540886
chr12 46558318 46560418 P63 GTRD no Skin (Keratinocyte) 21540890
chr12 46558384 46558398 POU4F1 JASPAR yes 120600419
chr12 46558384 46558400 POU4F2 JASPAR yes 120600420
chr12 46558384 46558400 POU4F3 JASPAR yes 120600421
chr12 46558387 46558401 GATA2 JASPAR yes 120600422
chr12 46558391 46558399 GATA5 JASPAR yes 120600423
chr12 46558395 46558409 POU1F1 JASPAR yes 120600424
Genes associated with rs113353639[chr12:46558396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More