EnhancerDB
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  3. rs113466530[chr17:70427153]
Enhancers that have rs113466530[chr17:70427153]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs113466530[chr17:70427153]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70426987 70427237 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21785152
chr17 70426990 70427220 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21785153
chr17 70426998 70427228 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785154
chr17 70427002 70427192 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785155
chr17 70427024 70427178 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785156
chr17 70427051 70427187 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21785158
chr17 70427149 70427155 GATA3 JASPAR yes 55787582
Genes associated with rs113466530[chr17:70427153], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More