EnhancerDB
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  3. rs113472148[chr17:80242550]
Enhancers that have rs113472148[chr17:80242550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs113472148[chr17:80242550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80242535 80242550 MEF2C JASPAR yes 56357602
chr17 80242536 80242551 MEF2A JASPAR yes 56357603
chr17 80242540 80242559 PAX5 JASPAR yes 56357604
chr17 80242547 80242556 HIC2 JASPAR yes 56357605
chr17 80242550 80242554 LFA1 TRANSFAC yes 56357606
chr17 80242550 80242570 TP63 JASPAR yes 56357607
Genes associated with rs113472148[chr17:80242550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More