EnhancerDB
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  3. rs113482212[chr1:230220120]
Enhancers that have rs113482212[chr1:230220120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs113482212[chr1:230220120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230219633 230220184 TEF1 GTRD no Bone (Osteoblast) 21391241
chr1 230219633 230220184 TEF1 GTRD no Bone (Osteoblast) 107878354
chr1 230220083 230220733 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391242
chr1 230220083 230220733 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878355
chr1 230220083 230220733 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878356
chr1 230220089 230220525 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878357
chr1 230220089 230220525 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878358
chr1 230220117 230220121 NFE TRANSFAC yes 36019695
Genes associated with rs113482212[chr1:230220120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More