EnhancerDB
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  3. rs113624828[chr1:15744017]
Enhancers that have rs113624828[chr1:15744017]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15740198 15759915 enh26553
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 15743639 15744318 vista487
VISTA
Transcript factors that have rs113624828[chr1:15744017]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15744007 15744021 GLIS2 JASPAR yes 26983963
chr1 15744007 15744021 GLIS3 JASPAR yes 26983964
chr1 15744007 15744021 GLIS2 JASPAR yes 118236812
chr1 15744007 15744021 GLIS3 JASPAR yes 118236813
chr1 15744012 15744025 NFKB1 JASPAR yes 26983965
chr1 15744012 15744025 NFKB2 JASPAR yes 26983966
chr1 15744012 15744025 NFKB1 JASPAR yes 118236814
chr1 15744012 15744025 NFKB2 JASPAR yes 118236815
chr1 15744013 15744024 NFKB1 JASPAR yes 26983967
chr1 15744013 15744024 NFKB1 JASPAR yes 118236816
chr1 15744014 15744024 NFKB1 JASPAR yes 26983968
chr1 15744014 15744024 NFKB1 JASPAR yes 118236817
chr1 15744014 15744025 NFKB1 JASPAR yes 26983969
chr1 15744014 15744025 NFKB1 JASPAR yes 118236818
Genes associated with rs113624828[chr1:15744017], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More