EnhancerDB
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  3. rs11385930[chr17:70394936]
Enhancers that have rs11385930[chr17:70394936]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs11385930[chr17:70394936]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70394322 70395327 ZBTB33 GTRD no Brain (SK-N-SH) 21784520
chr17 70394349 70395431 ZBTB33 GTRD no Brain (SK-N-SH) 21784523
chr17 70394365 70395462 ZBTB33 GTRD no Brain (SK-N-SH) 21784524
chr17 70394385 70394989 ZBTB33 GTRD no Brain (SK-N-SH) 21784525
chr17 70394389 70394946 ZBTB33 GTRD no Brain (SK-N-SH) 21784526
chr17 70394416 70395351 ZBTB33 GTRD no Brain (SK-N-SH) 21784527
chr17 70394459 70395243 ZBTB33 GTRD no Brain (SK-N-SH) 21784528
chr17 70394930 70394945 FOXP1 JASPAR yes 55783162
chr17 70394930 70394951 IRF1 JASPAR yes 55783163
chr17 70394931 70394946 FOXP1 JASPAR yes 55783164
chr17 70394931 70394952 IRF1 JASPAR yes 55783165
chr17 70394932 70394947 FOXP1 JASPAR yes 55783166
chr17 70394932 70394953 IRF1 JASPAR yes 55783167
chr17 70394933 70394948 FOXP1 JASPAR yes 55783168
chr17 70394934 70394949 FOXP1 JASPAR yes 55783169
chr17 70394935 70394950 FOXP1 JASPAR yes 55783170
chr17 70394935 70394956 IRF1 JASPAR yes 55783171
chr17 70394936 70394951 FOXP1 JASPAR yes 55783172
Genes associated with rs11385930[chr17:70394936], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More