EnhancerDB
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  3. rs113909117[chr1:23918177]
Enhancers that have rs113909117[chr1:23918177]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr1 23918101 23918449 vista753
VISTA
Transcript factors that have rs113909117[chr1:23918177]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23917962 23918482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802431
chr1 23918165 23918182 RXRA JASPAR yes 27444576
chr1 23918165 23918182 RXRA JASPAR yes 118249924
chr1 23918175 23918190 MEF2C JASPAR yes 27444577
chr1 23918175 23918190 MEF2C JASPAR yes 118249925
chr1 23918176 23918191 MEF2A JASPAR yes 27444578
chr1 23918176 23918191 MEF2A JASPAR yes 118249926
Genes associated with rs113909117[chr1:23918177], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More