EnhancerDB
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  3. rs113985241[chr19:8413660]
Enhancers that have rs113985241[chr19:8413660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 8412505 8422968 enh32882
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs113985241[chr19:8413660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 8412336 8413861 TCF7L2 GTRD no Colon (HCT116) 21847604
chr19 8412452 8413813 TCF7L2 GTRD no Colon (HCT116) 21847605
chr19 8412506 8413726 TCF7L2 GTRD no Colon (HCT116) 21847606
chr19 8412506 8413778 TCF7L2 GTRD no Colon (HCT116) 21847607
chr19 8412540 8413738 ZNF143 GTRD no Epithelial (MCF-7) 21847608
chr19 8412614 8413704 ZNF143 GTRD no Epithelial (MCF-7) 21847611
chr19 8412614 8413742 TCF7L2 GTRD no Colon (HCT116) 21847612
chr19 8412626 8414250 ZNF274 GTRD no Bone Marrow (K562) 21847616
chr19 8412664 8413830 TCF7L2 GTRD no Colon (HCT116) 21847624
chr19 8412701 8413713 ZNF274 GTRD no Liver (HepG2) 21847632
chr19 8412701 8413747 TCF7L2 GTRD no Colon (HCT116) 21847633
chr19 8412728 8414128 ZNF274 GTRD no Bone Marrow (K562) 21847640
chr19 8412736 8413671 ZNF274 GTRD no Bone Marrow (K562) 21847646
chr19 8412739 8413768 ZNF274 GTRD no Liver (HepG2) 21847649
chr19 8412745 8413705 TCF7L2 GTRD no Colon (HCT116) 21847651
chr19 8412745 8413756 TCF7L2 GTRD no Colon (HCT116) 21847652
chr19 8412748 8413752 TCF7L2 GTRD no Colon (HCT116) 21847654
chr19 8412761 8413872 ZNF143 GTRD no Epithelial (MCF-7) 21847660
chr19 8412773 8413699 ZNF274 GTRD no Liver (HepG2) 21847664
chr19 8412775 8413956 ZNF274 GTRD no Liver (HepG2) 21847665
chr19 8412789 8414258 ZNF274 GTRD no Bone Marrow (K562) 21847670
chr19 8412801 8413666 ZNF274 GTRD no Bone Marrow (K562) 21847677
chr19 8412804 8413821 ZNF274 GTRD no Bone Marrow (K562) 21847679
chr19 8412813 8413776 ZNF274 GTRD no Bone Marrow (K562) 21847688
chr19 8412818 8413669 ZNF143 GTRD no Epithelial (MCF-7) 21847691
chr19 8412832 8413996 ZNF274 GTRD no Bone Marrow (K562) 21847699
chr19 8412834 8413996 ZNF143 GTRD no Epithelial (MCF-7) 21847701
chr19 8412835 8413870 ZNF274 GTRD no Bone Marrow (K562) 21847702
chr19 8412883 8413731 TCF7L2 GTRD no Colon (HCT116) 21847724
chr19 8413001 8413783 ZNF274 GTRD no Bone Marrow (K562) 21847744
chr19 8413019 8413783 ZNF274 GTRD no Bone Marrow (K562) 21847746
chr19 8413238 8414112 ZNF274 GTRD no Bone Marrow (K562) 21847752
chr19 8413333 8415129 ZNF274 GTRD no Cervix (HeLa-S3) 21847754
chr19 8413408 8413661 ZNF274 GTRD no Bone Marrow (K562) 21847755
chr19 8413659 8413674 NR2C2 JASPAR yes 112361992
chr19 8413660 8413674 RXRB JASPAR yes 112361993
chr19 8413660 8413674 RXRG JASPAR yes 112361994
chr19 8413660 8413675 HNF4A JASPAR yes 112361995
Genes associated with rs113985241[chr19:8413660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More