EnhancerDB
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  3. rs113990339[chr15:41852003]
Enhancers that have rs113990339[chr15:41852003]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41848185 41859511 enh68908
Neural Stem Cells (H9) Uterus Embryonic Stem Cell Line (H1-hESC)
Transcript factors that have rs113990339[chr15:41852003]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41850695 41853853 TCF7L2 GTRD no Colon (HCT116) 108134976
chr15 41851652 41852172 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21651251
chr15 41851652 41852172 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108134977
chr15 41851683 41853135 ZNF274 GTRD no Blood (GM12878) 108134978
chr15 41851685 41852290 ZNF274 GTRD no Blood (GM12878) 108134979
chr15 41851736 41852095 ZNF274 GTRD no Blood (GM12878) 108134980
chr15 41851745 41852246 ZNF274 GTRD no Blood (GM12878) 108134981
chr15 41851756 41852198 ZNF274 GTRD no Cervix (HeLa-S3) 108134982
chr15 41851774 41852237 ZNF274 GTRD no Liver (HepG2) 108134983
chr15 41851779 41852221 ZNF274 GTRD no Bone Marrow (K562) 108134984
chr15 41851779 41852287 ZBTB33 GTRD no Brain (SK-N-SH) 108134985
chr15 41851842 41852172 ZNF274 GTRD no Blood (GM12878) 108134986
chr15 41851862 41852382 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21651252
chr15 41851862 41852382 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108134987
chr15 41851881 41852118 ZNF274 GTRD no Bone Marrow (K562) 108134988
chr15 41851905 41852616 TCF7L2 GTRD no Colon (HCT116) 108134989
chr15 41851998 41852008 BARHL2 JASPAR yes 22987920
chr15 41852000 41852004 YY1 TRANSFAC yes 22987921
Genes associated with rs113990339[chr15:41852003], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More