EnhancerDB
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  3. rs11403678[chr1:222003457]
Enhancers that have rs11403678[chr1:222003457]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr1 222002644 222003471 vista5226
VISTA
Transcript factors that have rs11403678[chr1:222003457]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222003451 222003472 IRF1 JASPAR yes 35572711
chr1 222003451 222003472 IRF1 JASPAR yes 118465110
chr1 222003453 222003468 PRDM1 JASPAR yes 35572712
chr1 222003453 222003468 STAT2 JASPAR yes 35572713
chr1 222003453 222003468 PRDM1 JASPAR yes 118465111
chr1 222003453 222003468 STAT2 JASPAR yes 118465112
chr1 222003456 222003471 FOXP1 JASPAR yes 35572714
chr1 222003456 222003471 FOXP1 JASPAR yes 118465113
Genes associated with rs11403678[chr1:222003457], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More