EnhancerDB
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  3. rs11411878[chr17:79016112]
Enhancers that have rs11411878[chr17:79016112]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79008825 79027145 enh17433
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs11411878[chr17:79016112]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79016106 79016127 IRF1 JASPAR yes 56300189
chr17 79016107 79016128 IRF1 JASPAR yes 56300190
chr17 79016111 79016126 FOXP1 JASPAR yes 56300191
chr17 79016112 79016127 FOXP1 JASPAR yes 56300192
chr17 79016112 79016133 IRF1 JASPAR yes 56300193
Genes associated with rs11411878[chr17:79016112], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More