EnhancerDB
  1. Home
  2. SNP
  3. rs11422962[chr17:53519436]
Enhancers that have rs11422962[chr17:53519436]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs11422962[chr17:53519436]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53519425 53519446 IRF1 JASPAR yes 54851225
chr17 53519426 53519447 IRF1 JASPAR yes 54851226
chr17 53519427 53519442 PRDM1 JASPAR yes 54851227
chr17 53519427 53519442 STAT2 JASPAR yes 54851228
chr17 53519428 53519442 SPIC JASPAR yes 54851229
chr17 53519428 53519442 STAT1 JASPAR yes 54851230
chr17 53519429 53519443 SPIC JASPAR yes 54851231
chr17 53519430 53519451 IRF1 JASPAR yes 54851232
chr17 53519431 53519452 IRF1 JASPAR yes 54851233
chr17 53519432 53519437 ETS2 TRANSFAC yes 54851234
chr17 53519434 53519449 FOXP1 JASPAR yes 54851235
chr17 53519435 53519450 FOXP1 JASPAR yes 54851236
chr17 53519436 53519451 FOXP1 JASPAR yes 54851237
Genes associated with rs11422962[chr17:53519436], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More